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Abbreviation Absorption AbsorptionDescriptor Abstract Abstract Abstract AbstractDescriptor AbstractDescriptor AbstractDescriptor AbstractFileLoader AbstractHtml2Text AbstractLookupProteinname Abstracts AbstractsDescriptor AbstractSentenceConsumer AbstractSentenceProcessor AbstractSentenceProducer AbstractSentenceTransformer AbstractText AbstractText AbstractTextDescriptor AbstractTextDescriptor AbstractTextItem AbstractTextItem AbstractTextItemDescriptor AbstractTextItemDescriptor AbstractTextractorDocumentIterator AccessionNumber AccessionNumber AccessionNumberDescriptor AccessionNumberDescriptor AccessionNumberItem AccessionNumberItem AccessionNumberItemDescriptor AccessionNumberItemDescriptor AccessionNumberList AccessionNumberList AccessionNumberListDescriptor AccessionNumberListDescriptor Acronym Acronym Acronym AcronymDescriptor AcronymDescriptor AcronymDescriptor AcronymItem AcronymItem AcronymItemDescriptor AcronymItemDescriptor Acronyms AcronymsDescriptor AcronymsItem AcronymsItemDescriptor Affiliation Affiliation AffiliationDescriptor AffiliationDescriptor AffiliationItem AffiliationItem AffiliationItemDescriptor AffiliationItemDescriptor Agency Agency AgencyDescriptor AgencyDescriptor AgencyItem AgencyItem AgencyItemDescriptor AgencyItemDescriptor AmbiguityDocumentIterator AmbiguityDocumentSequence AnalyzeQueries AnnotatedTerm AnnotationFormatReader AnnotationFormatWriter AnnotationSource AQuery Article Article Article ArticleChoice ArticleChoice ArticleChoiceDescriptor ArticleChoiceDescriptor ArticleDate ArticleDate ArticleDateDescriptor ArticleDateDescriptor ArticleDateSequenceSequence ArticleDateSequenceSequence ArticleDateSequenceSequenceDescriptor ArticleDateSequenceSequenceDescriptor ArticleDateSequenceSequenceSequence ArticleDateSequenceSequenceSequence ArticleDateSequenceSequenceSequenceDescriptor ArticleDateSequenceSequenceSequenceDescriptor ArticleDescriptor ArticleDescriptor ArticleId ArticleIdDescriptor ArticleIdItem ArticleIdItemDescriptor ArticleIdItemIdTypeType ArticleIdItemIdTypeTypeDescriptor ArticleIdList ArticleIdListDescriptor ArticleInfo ArticlePool ArticleProcessedListener ArticleProcessingCompleteEvent ArticleProcessingCompleteListener ArticleProcessor ArticleProducer ArticlePubModelType ArticlePubModelType ArticlePubModelTypeDescriptor ArticlePubModelTypeDescriptor ArticleSentencesPair ArticleSingleTermAnnotationIterator ArticleSingleTermAnnotationSource ArticleTermCount ArticleTitle ArticleTitle ArticleTitleDescriptor ArticleTitleDescriptor ArticleTitleItem ArticleTitleItem ArticleTitleItemDescriptor ArticleTitleItemDescriptor Author Author AuthorChoice AuthorChoice AuthorChoiceChoiceSequence AuthorChoiceChoiceSequence AuthorChoiceChoiceSequenceChoice AuthorChoiceChoiceSequenceChoice AuthorChoiceChoiceSequenceChoiceDescriptor AuthorChoiceChoiceSequenceChoiceDescriptor AuthorChoiceChoiceSequenceChoiceSequence AuthorChoiceChoiceSequenceChoiceSequence AuthorChoiceChoiceSequenceChoiceSequenceDescriptor AuthorChoiceChoiceSequenceChoiceSequenceDescriptor AuthorChoiceChoiceSequenceDescriptor AuthorChoiceChoiceSequenceDescriptor AuthorChoiceDescriptor AuthorChoiceDescriptor AuthorDescriptor AuthorDescriptor AuthorList AuthorList AuthorList AuthorListCompleteYNType AuthorListCompleteYNType AuthorListCompleteYNTypeDescriptor AuthorListCompleteYNTypeDescriptor AuthorListDescriptor AuthorListDescriptor AuthorListDescriptor AuthorValidYNType AuthorValidYNType AuthorValidYNTypeDescriptor AuthorValidYNTypeDescriptor BagOfWordExporter Begin BeginDescriptor BioSequenceWordReader BioStemmer Book Book BookDescriptor BookDescriptor BpcCommentGroup BpcCommentGroupDescriptor BroadJournalHeading BroadJournalHeading BroadJournalHeadingDescriptor BroadJournalHeadingDescriptor BroadJournalHeadingItem BroadJournalHeadingItem BroadJournalHeadingItemDescriptor BroadJournalHeadingItemDescriptor BroadJournalHeadingList BroadJournalHeadingList BroadJournalHeadingListDescriptor BroadJournalHeadingListDescriptor BuildAmbiguityDocumentIndex BuildDocStore BuildDocStoreFromPubmedArticles BuildDocumentIndex BuildDocumentIndexFromDB BuildDocumentIndexFromDocumentSequence BuildDocumentIndexFromGenbankFiles BuildDocumentIndexFromHTMLArticles BuildDocumentIndexFromPubmedArticles BuildDocumentIndexFromTextDocuments CandidateAcronym CandidateExpansion CaseInsensitiveBuilder CaseInsensitiveStore CaseInsensitiveStoreReader ChainExecutor CheckpointCallback Chemical Chemical ChemicalDescriptor ChemicalDescriptor ChemicalList ChemicalList ChemicalListDescriptor ChemicalListDescriptor Citation CitationDescriptor CitationSubset CitationSubset CitationSubsetDescriptor CitationSubsetDescriptor CitationSubsetItem CitationSubsetItem CitationSubsetItemDescriptor CitationSubsetItemDescriptor CitationType CitationTypeDescriptor CitationTypeTypeType CitationTypeTypeTypeDescriptor CitingCitation CitingCitationDescriptor CleanRatioData ClipExpansions ClippedExpansionXMLWriter Coden Coden CodenDescriptor CodenDescriptor CodenItem CodenItem CodenItemDescriptor CodenItemDescriptor CollectExpansions CollectionTitle CollectionTitle CollectionTitleDescriptor CollectionTitleDescriptor CollectionTitleItem CollectionTitleItem CollectionTitleItemDescriptor CollectionTitleItemDescriptor CollectiveName CollectiveName CollectiveNameDescriptor CollectiveNameDescriptor CollectiveNameItem CollectiveNameItem CollectiveNameItemDescriptor CollectiveNameItemDescriptor Comment CommentDescriptor CommentIn CommentIn CommentInDescriptor CommentInDescriptor CommentOn CommentOn CommentOnDescriptor CommentOnDescriptor CommentsCorrections CommentsCorrections CommentsCorrectionsDescriptor CommentsCorrectionsDescriptor CommentType CommentTypeChoice CommentTypeChoiceDescriptor CommentTypeChoiceSequence CommentTypeChoiceSequence2 CommentTypeChoiceSequence2Descriptor CommentTypeChoiceSequence3 CommentTypeChoiceSequence3Descriptor CommentTypeChoiceSequence4 CommentTypeChoiceSequence4Descriptor CommentTypeChoiceSequenceDescriptor CommentTypeDescriptor CommentTypeTypeType CommentTypeTypeTypeDescriptor Component ComponentDescriptor CompressionAdaptor CompressionAdaptorDelta CompressionAdaptorGamma Consortium ConsortiumDescriptor ConsortiumType ConsortiumTypeDescriptor CopyrightInformation CopyrightInformation CopyrightInformationDescriptor CopyrightInformationDescriptor CopyrightInformationItem CopyrightInformationItem CopyrightInformationItemDescriptor CopyrightInformationItemDescriptor CountNGramOccurences Country Country CountryDescriptor CountryDescriptor CountryItem CountryItem CountryItemDescriptor CountryItemDescriptor CountTissueOccurencesInEntries Coverage Coverage CoverageDescriptor CoverageDescriptor CoverageItem CoverageItem CoverageItemDescriptor CoverageItemDescriptor CreateRelationTrainingSet CRFDatasetWriter DataBank DataBank DataBankDescriptor DataBankDescriptor DataBankList DataBankList DataBankListCompleteYNType DataBankListCompleteYNType DataBankListCompleteYNTypeDescriptor DataBankListCompleteYNTypeDescriptor DataBankListDescriptor DataBankListDescriptor DataBankName DataBankName DataBankNameDescriptor DataBankNameDescriptor DataBankNameItem DataBankNameItem DataBankNameItemDescriptor DataBankNameItemDescriptor DatabaseTextConsumer DatasetWriter DateCompleted DateCompleted DateCompletedDescriptor DateCompletedDescriptor DateCompletedSequenceSequence DateCompletedSequenceSequence DateCompletedSequenceSequenceDescriptor DateCompletedSequenceSequenceDescriptor DateCompletedSequenceSequenceSequence DateCompletedSequenceSequenceSequence DateCompletedSequenceSequenceSequenceDescriptor DateCompletedSequenceSequenceSequenceDescriptor DateCreated DateCreated DateCreatedDescriptor DateCreatedDescriptor DateCreatedSequenceSequence DateCreatedSequenceSequence DateCreatedSequenceSequenceDescriptor DateCreatedSequenceSequenceDescriptor DateCreatedSequenceSequenceSequence DateCreatedSequenceSequenceSequence DateCreatedSequenceSequenceSequenceDescriptor DateCreatedSequenceSequenceSequenceDescriptor DateIssued DateIssued DateIssuedDescriptor DateIssuedDescriptor DateIssuedItem DateIssuedItem DateIssuedItemDescriptor DateIssuedItemDescriptor DateRevised DateRevised DateRevisedDescriptor DateRevisedDescriptor DateRevisedSequenceSequence DateRevisedSequenceSequence DateRevisedSequenceSequenceDescriptor DateRevisedSequenceSequenceDescriptor DateRevisedSequenceSequenceSequence DateRevisedSequenceSequenceSequence DateRevisedSequenceSequenceSequenceDescriptor DateRevisedSequenceSequenceSequenceDescriptor DatesAssociatedWithName DatesAssociatedWithName DatesAssociatedWithNameDescriptor DatesAssociatedWithNameDescriptor DatesAssociatedWithNameItem DatesAssociatedWithNameItem DatesAssociatedWithNameItemDescriptor DatesAssociatedWithNameItemDescriptor DatesOfSerialPublication DatesOfSerialPublication DatesOfSerialPublicationDescriptor DatesOfSerialPublicationDescriptor DatesOfSerialPublicationItem DatesOfSerialPublicationItem DatesOfSerialPublicationItemDescriptor DatesOfSerialPublicationItemDescriptor Day Day DayDescriptor DayDescriptor DayItem DayItem DayItemDescriptor DayItemDescriptor DBIndexerOptions DbManager DbReference DbReferenceDescriptor DbReferenceType DbReferenceTypeDescriptor DefaultArticleProducer DeleteCitation DeleteCitation DeleteCitationDescriptor DeleteCitationDescriptor DescriptorName DescriptorName DescriptorNameDescriptor DescriptorNameDescriptor DescriptorNameItem DescriptorNameItem DescriptorNameItemDescriptor DescriptorNameItemDescriptor DescriptorNameItemMajorTopicYNType DescriptorNameItemMajorTopicYNType DescriptorNameItemMajorTopicYNTypeDescriptor DescriptorNameItemMajorTopicYNTypeDescriptor Dictionary DidYouMean DidYouMeanDocument DidYouMeanDocumentFactory DidYouMeanDocumentSequence DidYouMeanFieldDescriptor DidYouMeanI DidYouMeanIndexer DidYouMeanQueryEngine DisplayData DocStore2TfIdf DocStoreDocumentCollection DocumentIndexManager DocumentQueryResult DocumentStoreBuilder DocumentStoreConsistencyChecker DocumentStoreReader DocumentStoreWriter DocumentTermPositions DocumentTokenManager Domain DomainDescriptor DoubleBagOfWordExporter DoubleBagOfWordFeatureCreationParameters DoubleTermAnnotation Edition Edition EditionDescriptor EditionDescriptor EditionItem EditionItem EditionItemDescriptor EditionItemDescriptor EditorList EditorListDescriptor ElectronicPubDate ElectronicPubDateDescriptor ElectronicPubDateOfficialDateYNType ElectronicPubDateOfficialDateYNTypeDescriptor End EndDescriptor EndPage EndPage EndPageDescriptor EndPageDescriptor EndPageItem EndPageItem EndPageItemDescriptor EndPageItemDescriptor Entry EntryDescriptor EntryType EntryTypeDescriptor ErratumFor ErratumFor ErratumForDescriptor ErratumForDescriptor ErratumIn ErratumIn ErratumInDescriptor ErratumInDescriptor Event EventDescriptor EventType EventTypeDescriptor EventTypeTypeType EventTypeTypeTypeDescriptor Evidence EvidenceDescriptor EvidenceType EvidenceTypeCategoryType EvidenceTypeCategoryTypeDescriptor EvidenceTypeDescriptor ExcludedPositionProvider ExcludeWindowCenter Expansion ExpansionAnalyser ExpansionDescriptor ExpansionHandler Expansions ExpansionsDescriptor ExpansionsItem ExpansionsItemDescriptor ExpansionTerm ExportArticleFeatures ExportImport ExportRecords ExportRecordsByArticle ExportTermsByArticle ExportTrainingRecords ExportTrainingRecordsLeftRight ExportUnannotatedRecords ExtractionEngine ExtractionEngineConstants FastaFileLoader FastaParser Feature FeatureCreationParameters FeatureDescriptor Features FeatureType FeatureTypeDescriptor FeatureTypeTypeType FeatureTypeTypeTypeDescriptor Filter FindTerms FirstName FirstName FirstNameDescriptor FirstNameDescriptor FirstNameItem FirstNameItem FirstNameItemDescriptor FirstNameItemDescriptor ForeName ForeName ForeNameDescriptor ForeNameDescriptor ForeNameItem ForeNameItem ForeNameItemDescriptor ForeNameItemDescriptor Frequency Frequency FrequencyCalculator FrequencyDescriptor FrequencyDescriptor FrequencyItem FrequencyItem FrequencyItemDescriptor FrequencyItemDescriptor FrequencyItemFrequencyTypeType FrequencyItemFrequencyTypeType FrequencyItemFrequencyTypeTypeDescriptor FrequencyItemFrequencyTypeTypeDescriptor FrequencyScorer FrequencyStorage FrequencyStorageImpl FSMPrefixSuffix GenbankParser Gene GeneDescriptor GeneLocation GeneLocationDescriptor GeneLocationType GeneLocationTypeDescriptor GeneLocationTypeTypeType GeneLocationTypeTypeTypeDescriptor GeneNameType GeneNameTypeDescriptor GeneNameTypeTypeType GeneNameTypeTypeTypeDescriptor GeneralNote GeneralNote GeneralNoteDescriptor GeneralNoteDescriptor GeneralNoteItem GeneralNoteItem GeneralNoteItemDescriptor GeneralNoteItemDescriptor GeneralNoteItemOwnerType GeneralNoteItemOwnerType GeneralNoteItemOwnerTypeDescriptor GeneralNoteItemOwnerTypeDescriptor GeneSymbol GeneSymbol GeneSymbolDescriptor GeneSymbolDescriptor GeneSymbolItem GeneSymbolItem GeneSymbolItemDescriptor GeneSymbolItemDescriptor GeneSymbolList GeneSymbolList GeneSymbolListDescriptor GeneSymbolListDescriptor getTermsByClass Grant Grant GrantDescriptor GrantDescriptor GrantID GrantID GrantIDDescriptor GrantIDDescriptor GrantIDItem GrantIDItem GrantIDItemDescriptor GrantIDItemDescriptor GrantList GrantList GrantListCompleteYNType GrantListCompleteYNType GrantListCompleteYNTypeDescriptor GrantListCompleteYNTypeDescriptor GrantListDescriptor GrantListDescriptor HashTermMap History HistoryDescriptor Hour Hour HourDescriptor HourDescriptor HourItem HourItem HourItemDescriptor HourItemDescriptor Html2Text Html2Text2DB Html2TextArticleLoader Html2TextNoref Html2TextTagRef HTMLArticleConversionProcessDirectory HTMLByteLocator HtmlByteLocatorTextExtractingVisitor IdentityScoringMatrix ImportSVMResults ImportSVMResultsByAnnotation ImportSVMResultsByArticle Imprint Imprint ImprintDescriptor ImprintDescriptor ImprintItem ImprintItem ImprintItemDescriptor ImprintItemDescriptor Indexer IndexerOptions IndexerOptions.StemmerChoice Initials Initials InitialsDescriptor InitialsDescriptor InitialsItem InitialsItem InitialsItemDescriptor InitialsItemDescriptor Interactant InteractantDescriptor InteractantGroup InteractantGroupDescriptor InteractantType InteractantTypeDescriptor Investigator Investigator InvestigatorDescriptor InvestigatorDescriptor InvestigatorList InvestigatorList InvestigatorListDescriptor InvestigatorListDescriptor InvestigatorSequence InvestigatorSequence InvestigatorSequenceChoice InvestigatorSequenceChoice InvestigatorSequenceChoiceDescriptor InvestigatorSequenceChoiceDescriptor InvestigatorSequenceChoiceSequence InvestigatorSequenceChoiceSequence InvestigatorSequenceChoiceSequenceDescriptor InvestigatorSequenceChoiceSequenceDescriptor InvestigatorSequenceDescriptor InvestigatorSequenceDescriptor IResultTerm Isequence IsequenceDescriptor IsequenceTypeType IsequenceTypeTypeDescriptor ISOAbbreviation ISOAbbreviation ISOAbbreviationDescriptor ISOAbbreviationDescriptor ISOAbbreviationItem ISOAbbreviationItem ISOAbbreviationItemDescriptor ISOAbbreviationItemDescriptor Isoform IsoformDescriptor IsoformType IsoformTypeDescriptor ISSN ISSN ISSNDescriptor ISSNDescriptor ISSNItem ISSNItem ISSNItemDescriptor ISSNItemDescriptor Issue Issue IssueDescriptor IssueDescriptor IssueItem IssueItem IssueItemDescriptor IssueItemDescriptor JDOArticleProducer JdoExtension JDOSentenceProducer Journal Journal JournalDescriptor JournalDescriptor JournalIssue JournalIssue JournalIssueDescriptor JournalIssueDescriptor Keyword Keyword Keyword KeywordDescriptor KeywordDescriptor KeywordDescriptor KeywordItem KeywordItem KeywordItemDescriptor KeywordItemDescriptor KeywordItemMajorTopicYNType KeywordItemMajorTopicYNType KeywordItemMajorTopicYNTypeDescriptor KeywordItemMajorTopicYNTypeDescriptor KeywordList KeywordList KeywordListDescriptor KeywordListDescriptor KeywordListOwnerType KeywordListOwnerType KeywordListOwnerTypeDescriptor KeywordListOwnerTypeDescriptor KeywordPairAnalysed Kinetics KineticsDescriptor Language Language LanguageDescriptor LanguageDescriptor LanguageItem LanguageItem LanguageItemDescriptor LanguageItemDescriptor LastName LastName LastNameDescriptor LastNameDescriptor LastNameItem LastNameItem LastNameItemDescriptor LastNameItemDescriptor Lineage LineageDescriptor Link LinkDescriptor LoadAnnotations Location LocationDescriptor LocationType LocationTypeDescriptor LocationTypeSequence LocationTypeSequenceDescriptor LogarithmicDocumentCalculator LogarithmicTermCalculator LongDenseAbsoluteList LongDenseDeltaList LongDenseList LongestCommonSubsequence LongestCommonSubstring LookupException LookupInteractions LookupProteinname